HighlandReefer
05/02/2010, 07:47 AM
Experimental observations on fungal diagenesis of carbonate
substrates
Kamal Kolo,1 Eddy Keppens,1 Alain Pre´at,2 and Philippe Claeys1
Received 22 March 2006; revised 10 September 2006; accepted 17 October 2006; published 27 January 2007
http://prog4.vub.ac.be/~dglg/Web/Claeys/Pubs/Kolo-etal-2007.pdf
From this article:
"Conclusions
[75] The role of fungi may be of great significance in the
diagenesis of carbonate rocks. In the present study, the
fungal interaction with carbonate substrates (thin sections
and rock chips) triggered specific diagenetic processes that
produced significant diagenesis of substrates’ petrography
and chemistry, in many aspects comparable to sedimentary
diagenesis. The diagenetic processes included substrate
dissolution, neo-mineral formation, biomineralization,
micritization, demicritization, grain-to-grain bridging,
cementation, replacement, open-space filling, porosity permeability
enhancement grain size alteration, concentric
zonation structures, isotopic fractionation, neo-substrate formation
and biostratification. These processes, driven by the
biochemical (organic acids) and biomechanical (growth
pressure) potency of fungi, introduced new textures and
structures, i.e., alveolar-honeycomb, mouldic-replacement
porosity, intergranular and intragranular porosity, whole
crystal replacement, and zonal-concentric structures. Original
carbonate cement was removed through a demicritization
process. A new type of micrite-size cement, named
here ‘‘biomineral cement’’, was formed between the grains
in the form of bridging-meniscus cement and as biomineralized
fungal hyphae. This new cement also lined
pores in similar mode to spar cement. Dolomite or calcite
crystals from the substrates were micritized by dissolution-
biomineral precipitation on their surfaces. Fungal
interaction produced ‘‘biological stratification’’ when
new substrates, totally composed of micrite-size biominerals
(mainly Ca- Mg- oxalates), were precipitated on the
original calcitic or dolomitic substrates.
[76] Fungal interaction significantly altered the isotopic
and mineralogical composition of the substrates. The isotopic
signature of the newly formed biominerals is considerably
different from the signature of the substrates,
suggesting a significant isotope fractionation. Compared
to the original unattacked surfaces, the d13C of the newly
formed minerals and attacked substrates show considerable
depletion while the d18O values show enrichment.
[77] Mineralogically, Ca and Mg were recycled from calcite
and dolomite into the newly formed biominerals:
weddellite, whewellite, glushinskite, protodolomite and
possibly struvite, where they filled voids, selectively precipitated
on grain boundaries, biomineralized fungal
hyphae, and also formed new substrates. This recycling
was selective and reflected the chemistry of the substrate.
Mg-biominerals (oxalates, protodolomite and possible
struvite) were only formed on dolomitic substrates, while
Ca-biominerals were formed on both calcitic and dolomitic
ones. Of particular significance was the formation of
‘protodolomite’ during fungal interaction with the dolomitic
substrate. The formation of this ‘‘protodolomite’’
may signal an unprecedented case of a sedimentary dolomite
being recycled within a fungal-carbonate substrate
environment.
[78] In the present study, the role of fungi in the diagenesis
of carbonate rocks significantly exceeded that of
simple surface bioweathering, the results approaching those
of sedimentary diagenesis, where petrography, mineralogy
and chemistry are changed. This role shows fungi to be
important players in the redistribution of metals, especially
Ca, Mg and C and reshaping rock surfaces."
substrates
Kamal Kolo,1 Eddy Keppens,1 Alain Pre´at,2 and Philippe Claeys1
Received 22 March 2006; revised 10 September 2006; accepted 17 October 2006; published 27 January 2007
http://prog4.vub.ac.be/~dglg/Web/Claeys/Pubs/Kolo-etal-2007.pdf
From this article:
"Conclusions
[75] The role of fungi may be of great significance in the
diagenesis of carbonate rocks. In the present study, the
fungal interaction with carbonate substrates (thin sections
and rock chips) triggered specific diagenetic processes that
produced significant diagenesis of substrates’ petrography
and chemistry, in many aspects comparable to sedimentary
diagenesis. The diagenetic processes included substrate
dissolution, neo-mineral formation, biomineralization,
micritization, demicritization, grain-to-grain bridging,
cementation, replacement, open-space filling, porosity permeability
enhancement grain size alteration, concentric
zonation structures, isotopic fractionation, neo-substrate formation
and biostratification. These processes, driven by the
biochemical (organic acids) and biomechanical (growth
pressure) potency of fungi, introduced new textures and
structures, i.e., alveolar-honeycomb, mouldic-replacement
porosity, intergranular and intragranular porosity, whole
crystal replacement, and zonal-concentric structures. Original
carbonate cement was removed through a demicritization
process. A new type of micrite-size cement, named
here ‘‘biomineral cement’’, was formed between the grains
in the form of bridging-meniscus cement and as biomineralized
fungal hyphae. This new cement also lined
pores in similar mode to spar cement. Dolomite or calcite
crystals from the substrates were micritized by dissolution-
biomineral precipitation on their surfaces. Fungal
interaction produced ‘‘biological stratification’’ when
new substrates, totally composed of micrite-size biominerals
(mainly Ca- Mg- oxalates), were precipitated on the
original calcitic or dolomitic substrates.
[76] Fungal interaction significantly altered the isotopic
and mineralogical composition of the substrates. The isotopic
signature of the newly formed biominerals is considerably
different from the signature of the substrates,
suggesting a significant isotope fractionation. Compared
to the original unattacked surfaces, the d13C of the newly
formed minerals and attacked substrates show considerable
depletion while the d18O values show enrichment.
[77] Mineralogically, Ca and Mg were recycled from calcite
and dolomite into the newly formed biominerals:
weddellite, whewellite, glushinskite, protodolomite and
possibly struvite, where they filled voids, selectively precipitated
on grain boundaries, biomineralized fungal
hyphae, and also formed new substrates. This recycling
was selective and reflected the chemistry of the substrate.
Mg-biominerals (oxalates, protodolomite and possible
struvite) were only formed on dolomitic substrates, while
Ca-biominerals were formed on both calcitic and dolomitic
ones. Of particular significance was the formation of
‘protodolomite’ during fungal interaction with the dolomitic
substrate. The formation of this ‘‘protodolomite’’
may signal an unprecedented case of a sedimentary dolomite
being recycled within a fungal-carbonate substrate
environment.
[78] In the present study, the role of fungi in the diagenesis
of carbonate rocks significantly exceeded that of
simple surface bioweathering, the results approaching those
of sedimentary diagenesis, where petrography, mineralogy
and chemistry are changed. This role shows fungi to be
important players in the redistribution of metals, especially
Ca, Mg and C and reshaping rock surfaces."